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As i stated in your other thread, the issue is likely either the IPDM/er or the ECM. Whenever the fans come as soon you turn the key ON indicates that the ECU has lost CANBUS communications:
Again, any chance the ECM or anything got wet?
This might have nothing to do at all with the engine swap.
I am going to tag @BULL here as he may have some ideas. I do not think it is the ECM but rather the IPDM/er. Any chance it got wet from coolant when the heater hose connector failed?